Package: BasketTrial 0.1.0
BasketTrial: Bayesian Basket Trial Design and Analysis
Provides tools for Bayesian basket trial design and analysis using a novel three-component local power prior framework with global borrowing control, pairwise similarity assessment and a borrowing threshold. Supports simulation-based evaluation of operating characteristics and comparison with other methods. Applicable to both equal and unequal sample size settings in early-phase oncology trials. For more details see Zhou et al. (2023) <doi:10.48550/arXiv.2312.15352>.
Authors:
BasketTrial_0.1.0.tar.gz
BasketTrial_0.1.0.zip(r-4.7)BasketTrial_0.1.0.zip(r-4.6)BasketTrial_0.1.0.zip(r-4.5)
BasketTrial_0.1.0.tgz(r-4.6-any)BasketTrial_0.1.0.tgz(r-4.5-any)
BasketTrial_0.1.0.tar.gz(r-4.7-any)BasketTrial_0.1.0.tar.gz(r-4.6-any)
BasketTrial_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
BasketTrial/json (API)
| # Install 'BasketTrial' in R: |
| install.packages('BasketTrial', repos = c('https://wonderzhm.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/wonderzhm/baskettrial/issues
Last updated from:3240ae8122. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 87 | ||
| source / vignettes | OK | 140 | ||
| linux-release-x86_64 | OK | 102 | ||
| macos-release-arm64 | OK | 127 | ||
| macos-oldrel-arm64 | OK | 203 | ||
| windows-devel | OK | 61 | ||
| windows-release | OK | 61 | ||
| windows-oldrel | OK | 57 | ||
| wasm-release | OK | 87 |
Exports:generate.dataget.Q.bwerget.weighted.powerIndependentJSDlocalPPpost.infer
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Generate Data for A Basket Trial Design | generate.data |
| Get Efficacy Cutoff based on Basket-Wise Error Rate (BWER) Control | get.Q.bwer |
| Get Weighted Type I Error and Power. | get.weighted.power |
| Independent Beta Prior for Bayesian Basket Trial | Independent |
| JSD (Fujikawa et al., 2020) Method for Bayesian Basket Trial | JSD |
| Local Power Prior for Bayesian Basket Trial | localPP |
| Posterior Inference for Simulated Basket Trial Data | post.infer |
